Introduction | A working example | Limitations of repeated observations models | References

Introduction | Computation time scaling | Improving computation times | References

Introduction | A working example | References

Introduction | The generalized dynamic phylogenetic model | A working example | Available response distributions | Conclusion | References

Introduction | Setup | A working example

Overview | Setup | Fit the model | Ancestral states on the latent scale | Visualizing latent ancestral states on the tree | Joint latent-space scatterplot | Ancestral states on the response scale | Pie chart tree: response-scale probabilities | Working with raw posterior draws | Identifying nodes on the tree | Selecting specific nodes and variables

Introduction | A working example

Introduction | A working example

Introduction | A working example

Introduction | Default priors | Limitations on setting priors